Insertion junction: CLIP2.059045_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059045
Chromosome:chromosome 10
Location:4204320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449200 ANK5 (1 of 1) PTHR22849//PTHR24133//PTHR24133:SF23 - WDSAM1 PROTEIN // FAMILY NOT NAMED // SUBFAMILY NOT NAMED; Predicted protein with ankyrin repeats 5'UTR
Cre10.g449250 KAP1,FLA3 Kinesin II Associated Protein 1; (1 of 1) PTHR15605:SF2 - KINESIN-ASSOCIATED PROTEIN 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTGAGAGGGCCGCAAATAGACTGTATTCTCATCACAGGCGCATTCT
Internal bar code:GGAGATCACCCTCATCACACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1622
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGAACATGCAACGCCCTACT
Suggested primer 2:TGTCCTCGCAATTCAGGCTT