Insertion junction: CLIP2.059051_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059051
Chromosome:chromosome 9
Location:4585149
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401441 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCCGACCTTCATTCCTGAAAGCCCTCAGTGGTTCGAGTCCAACGCA
Internal bar code:CGAATATCGACACCTAGCGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4754
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGTCACACTTGCACGG
Suggested primer 2:GACGACCGACCCTGAACTTT