Insertion junction: CLIP2.059058_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059058
Chromosome:chromosome 6
Location:1043513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800615 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein 3'UTR
Cre06.g800616 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATGGTGCGCCTCGTACGGCGCCTTGAAGTTACGCAGCAGCCCCGCAC
Internal bar code:GACCAGTCACAGAGGACAGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2811
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCCCATTCCATCTGCTCC
Suggested primer 2:TTCGTTGGTTCACGGGAGAG