Insertion junction: CLIP2.059068_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059068
Chromosome:chromosome 6
Location:1585615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g261300 (1 of 2) K09660 - mannose-P-dolichol utilization defect 1 (MPDU1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCGGCGGTGTCGAAACTGGCTCGCGCGACACGGCGCCTGCTCCTTTC
Internal bar code:GCTGGCCATTAGTGCGGTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3331
LEAP-Seq percent confirming:63.6364
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGCACTTGGCCCAGATA
Suggested primer 2:TGTTGTAGGCGACAGTGACC