Insertion junction: CLIP2.059075_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059075
Chromosome:chromosome 13
Location:4585689
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGCATATCCCTACCGCAGCTGTGCTGCCGCTCAGCTAGCCAGCTGCA
Internal bar code:ATTATACAGTGGATTTTGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1260
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCATCTCGTCACCCCT
Suggested primer 2:TCGCATATCGACCATTCGCA