Insertion junction: CLIP2.059077_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059077
Chromosome:chromosome 5
Location:1501033
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234655 (1 of 1) K17550 - protein phosphatase 1 regulatory subunit 7 (PPP1R7, SDS22) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCAGCACGGGGCCCCCGTGCCTTCTAAACCCCCGTGCGGTTTTGCT
Internal bar code:ACGTAAGGGCATTGTGGGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1640
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAACAAGCACAAGCATC
Suggested primer 2:ATGACTAGCCGTGCCGTATG