Insertion junction: CLIP2.059081_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059081
Chromosome:chromosome 4
Location:219595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217220 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAAGGCTCAACGTTCGTGTAAGCCACCTGAGGTTCTAAAGTGACGAAG
Internal bar code:AGCTGGAAATAAGCGGAGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:2.3622
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:124
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGAATGGGACTCATGGGG
Suggested primer 2:CAAACTTTGGTGGTCAGGCG