Insertion junction: CLIP2.059083_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059083
Chromosome:chromosome 10
Location:5511911
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458000 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACAGGTCTGGTCCGTTCTTCGTCTGCCTAGGCACTACCAATCTGGGT
Internal bar code:CCCCTGTATTGGGGTTAGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1196
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGGGTGCAGTCATTAAGT
Suggested primer 2:CACAGTTCGTGTTTGGGCAG