Insertion junction: CLIP2.059084_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059084
Chromosome:chromosome 10
Location:6381159
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464264 (1 of 1) PTHR13355:SF12 - GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACGCTGTTCACCGCTATGTTGTGACGACATCGGTAATACTGATGCCTT
Internal bar code:AAAGTGGGAATTTGCATTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1486
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTGGATGATGGGACGT
Suggested primer 2:CAGCATAGCATGTGTTCGCC