Insertion junction: CLIP2.059092_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059092
Chromosome:chromosome 2
Location:2533739
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092284 (1 of 1) 1.13.11.19 - Cysteamine dioxygenase / Persulfurase 5'UTR
Cre02.g092350 CYP51G1,CYP6 (1 of 1) 1.14.13.70 - Sterol 14-alpha-demethylase / Obtusufoliol 14-demethylase; Cytochrome P450, CYP51 superfamily 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGACATCCAATATCATAAGCTGATTTCACGTGCAAGCTGTTTCCTGT
Internal bar code:TGGAATGGAGTATTAATAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1151
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGATAGGACGAGGCTGTC
Suggested primer 2:TCCGTCAACTGAGGTCAAGC