Insertion junction: CLIP2.059093_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059093
Chromosome:chromosome 2
Location:1279221
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082250 HSK2 (1 of 1) K00872 - homoserine kinase (thrB1); Homoserine kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATCTGGTGATCCGTCGGTGCCGATAGTTATCGTGCAGGGACCGGGGG
Internal bar code:AACGTACGTTCAAAGCCAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGATTTTGGTGCTTGCA
Suggested primer 2:CACCACGTCAAGAAGCCTCT