Insertion junction: CLIP2.059110_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059110
Chromosome:chromosome 13
Location:3936335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801566 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCTACGCACGGACCAAGGTCCCGCGTGCCTTAAGGAAGAGTCCCATCG
Internal bar code:CTTTACATCTATCTGTCCTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6242
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CAATTGGTAGAGCATGCCGC
Suggested primer 2:TGCATTCTCTGGGCACATGT