Insertion junction: CLIP2.059120_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059120
Chromosome:chromosome 6
Location:928336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256200 HAT3 Histone acetyltransferase 3; (1 of 1) K06062 - histone acetyltransferase (PCAF, KAT2, GCN5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGATGGTGGCTCAGGCAGGCTCGCATATCTGCTGGTGTGCTTTCTGGGA
Internal bar code:TGCTGACCTGCCCGCAGTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2036
LEAP-Seq percent confirming:92.6829
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTACTGTGTCTGTGGC
Suggested primer 2:GGTGGAAGCCTGGACATGAA