Insertion junction: CLIP2.059129_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059129
Chromosome:chromosome 3
Location:7491227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205550 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGAACACCAGCGCCACCAGTGCCCAGCACGACACGAAGTACGTTCCC
Internal bar code:ATGAGCTAATGGGTGTCAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2432
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCATTTGGCCTCTCGGTG
Suggested primer 2:TCGGAATGAGGAAGGTGTGC