Insertion junction: CLIP2.059135_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059135
Chromosome:chromosome 1
Location:6203946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044200 (1 of 17) IPR001305 - Heat shock protein DnaJ, cysteine-rich domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGTCAGCGCAACTTGAGTCGCGCTAGGATGCGTGGGTTGGGCGTCGAG
Internal bar code:GCAGATGGGTACATAGTGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1623
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCGAAGGACAGGCTTT
Suggested primer 2:TGAAGTGGATGAGCTGGCTG