Insertion junction: CLIP2.059136_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059136
Chromosome:chromosome 14
Location:1715926
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618950 3'UTR
Cre14.g618979 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGAGCGAAAAGCGTCGCCATGGGTAGGGAGCGGCATGGGCACCGGTT
Internal bar code:TCCGAAATACAAATATTCGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1269
LEAP-Seq percent confirming:82.7586
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGTCGGCTGCAAGAATT
Suggested primer 2:GGCATACACCGTACCGTCAT