Insertion junction: CLIP2.059138_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059138
Chromosome:chromosome 16
Location:426738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693400 3'UTR
Cre16.g693450 ISG-C1 (1 of 32) IPR029062 - Class I glutamine amidotransferase-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCAGTTTTCTGAGCTCCCTCCTGCCGGTACTGGACAGGATGTACGGT
Internal bar code:AGATTTGGTCAGGTACCGCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2035
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCTGCACGGGTTTTTG
Suggested primer 2:GCGTCGGGGTTTGGAGATAT