Insertion junction: CLIP2.059141_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059141
Chromosome:chromosome 1
Location:6863646
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049200 (1 of 4) PTHR10334//PTHR10334:SF224 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCGCGGCCGCCTAGCCCAGCGCCGCCCAGCCCAGCGCCGCCTGTCC
Internal bar code:GTTAGCTTATGACTCCGATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2390
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAACCTAACACATCGCAC
Suggested primer 2:CCTTCACCCTTTCCGCCTAG