Insertion junction: CLIP2.059143_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059143
Chromosome:chromosome 2
Location:3594449
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099601 (1 of 4) PF01342 - SAND domain (SAND) CDS
Cre02.g800214 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCGTTGTCGCCGTCACCGGCGCCGCCTCCACCGTCGGCACCATCGCC
Internal bar code:GCTCGCGAAACCGCAATGTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTTCAGGTGCCCAAACTG
Suggested primer 2:GGATGCGGATGTTTGGATGC