Insertion junction: CLIP2.059143_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059143
Chromosome:chromosome 3
Location:2689007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160900 (1 of 1) PF07714//PF12796//PF13857 - Protein tyrosine kinase (Pkinase_Tyr) // Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTAACTGACTGTTATAAGGCCAAACTTGCCGATAAATGCTGCTTGAGG
Internal bar code:TTCAAAAAAGTTATGACCATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2804
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAACCCATCAGAGCGTCA
Suggested primer 2:GATTGAGGGGTGTGCTTCCA