Insertion junction: CLIP2.059153_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059153
Chromosome:chromosome 8
Location:127287
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g358534 (1 of 2) IPR000679//IPR001025 - Zinc finger, GATA-type // Bromo adjacent homology (BAH) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCTGGGCAAGGCCAGTCCAGATCATGGTGGCCTTAGTCTCGGCCGCA
Internal bar code:TAGGCGAGCGGGGCCGGTTGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1632
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGTGTCATGAATTCGC
Suggested primer 2:GCACCCACTTCAATTGCCTG