Insertion junction: CLIP2.059156_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059156
Chromosome:chromosome 7
Location:3938923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339554 (1 of 1) K03372 - MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 (ACATN, SLC33A1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACACCTTCACCGGCTCGGAATGGGCTTGTGTGTGGGAGGAAGGGAGCG
Internal bar code:TCATATGTAAGTGCAATAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1847
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAACGTCAAAAGCGGGCT
Suggested primer 2:TTGAGGGAGTAGGGGTAGGC