Insertion junction: CLIP2.059156_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059156
Chromosome:chromosome 7
Location:3938934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g339554 (1 of 1) K03372 - MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1 (ACATN, SLC33A1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGGCATGCCGACAACGCGCAGCCGCGCAAAGGCGGGCGCCAACGGCA
Internal bar code:TCATATGTAAGTGCAATAAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:78
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAGGGAGTAGGGGTAGGC
Suggested primer 2:TCTAACGTCAAAAGCGGGCT