Insertion junction: CLIP2.059158_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059158
Chromosome:chromosome 7
Location:2921439
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g332650 NCT1 (1 of 2) PTHR11662:SF3 - INNER MEMBRANE TRANSPORT PROTEIN RHMT; High-affinity nicotinic acid transporter 3'UTR
Cre07.g332700 (1 of 1) PF00069//PF13639 - Protein kinase domain (Pkinase) // Ring finger domain (zf-RING_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGCGGTTCTGCCCTTTCTAACTCGGGTTTCTGGCTTTCTGGGTCAGT
Internal bar code:CGAACGATACCGATTCTGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCGTCATGTACACCACA
Suggested primer 2:TTCTCCATGAACCGCTCACC