Insertion junction: CLIP2.059161_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059161
Chromosome:chromosome 13
Location:675454
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g566300 RRM12,RSMD (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase; Putative rRNA (guanine-N2-)-methyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCAAAGTCATCATCATCTGAGTCATCGTCTGAAGCGCGTCGAGGCGCG
Internal bar code:TATGATCTGCTTAGGCAGGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:504
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGGGTGTACATGTGTGTG
Suggested primer 2:TCCATCAGCTGCTTCACCTG