Insertion junction: CLIP2.059171_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059171
Chromosome:chromosome 11
Location:1249165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467695 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATCCTCATCACCCGGACATAGCCGGGGTCGGTCTGTACAGGCACCTAG
Internal bar code:CAATATTTTGGTGATGAAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3550
LEAP-Seq percent confirming:97.5309
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTTTGTCGTCTGTCCTG
Suggested primer 2:AGCATGAGAAGGGGTTGAGC