Insertion junction: CLIP2.059172_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059172
Chromosome:chromosome 11
Location:3643779
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g478300 SOM4 S-adenosyl-L-methionine-dependent O-methyltransferase; (1 of 4) PTHR13600//PTHR13600:SF12 - LEUCINE CARBOXYL METHYLTRANSFERASE // LEUCINE CARBOXYL METHYLTRANSFERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCACAAGGAAAACGTTACGCAAAGACAGTGTATGCGATGCAGCAAA
Internal bar code:TTGACATGGTTGCCATGAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:76
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAAAACGCTCTCACAAGC
Suggested primer 2:GAGGTGAGGAGGATGGAGGT