Insertion junction: CLIP2.059183_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059183
Chromosome:chromosome 17
Location:281680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g697850 (1 of 226) IPR012337 - Ribonuclease H-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACACTGTAGCCCCGCAGCTACTCACGAAAACATTATCGTTTGCTCCTAA
Internal bar code:GTGTCACTGGTAATCTCTGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1441
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCACGCAGAGTTGTCAGG
Suggested primer 2:CTCCCGCACCATCATATCCC