Insertion junction: CLIP2.059184_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059184
Chromosome:chromosome 8
Location:3811921
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTTCCTCGCGGTGCCCGGGAGGGATTCGCGCTAGAAGCTGCTAGCTC
Internal bar code:ACTACTTTTTAAAATGTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3181
LEAP-Seq percent confirming:44.2308
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:AACGAGCATAGCGAGTAGGC
Suggested primer 2:GATAGATGGGGGCGGACAAG