Insertion junction: CLIP2.059186_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059186
Chromosome:chromosome 6
Location:4976593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281450 SRR22 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) 1.4.3.13//2.7.11.1 - Protein-lysine 6-oxidase / Lysyl oxidase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGCCGCGCTCCATCCGCACGTAGCGGCCACCATCCCGCACCGCACC
Internal bar code:GAAATTTTTATTGGTGGACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1879
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTTCCCGCTTGTCCTGT
Suggested primer 2:TAGCAGGTGTGTGCATACGG