Insertion junction: CLIP2.059187_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059187
Chromosome:chromosome 3
Location:3494597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g167250 (1 of 1) PF05673 - Protein of unknown function (DUF815) (DUF815) 3'UTR
Cre03.g167300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTATCAGACAGCACGCGCGGGCCTTCGCATGGACGCGTACTGACGC
Internal bar code:AGGCCGTCGTTACCCTGGTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACCTCCCCTCCCTATG
Suggested primer 2:GTGGCGGATACTGTCGAGAG