Insertion junction: CLIP2.059188_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059188
Chromosome:chromosome 17
Location:1070544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703700 SCLB1,SCL2,SUCLA2 Succinate-CoA ligase beta chain; (1 of 1) K01900 - succinyl-CoA synthetase beta subunit (LSC2) 5'UTR
Cre17.g703750 (1 of 1) PF14222 - Cell morphogenesis N-terminal (MOR2-PAG1_N) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTCTTGGATTGTTTGTGCATGCATAACAAGATATTGCCAAGCTGAAAT
Internal bar code:TTCACAGAGCGAGAGAGCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCTGCAGCACCTGTAA
Suggested primer 2:CAGCACTCTGACAGCCTGAA