Insertion junction: CLIP2.059193_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059193
Chromosome:chromosome 12
Location:5682609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531950 (1 of 4) PTHR10217//PTHR10217:SF509 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CNG CHANNEL-LIKE, ISOFORM E 5'UTR
Cre12.g532000 (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTAAGGGTTTTGTGAATGGTCCTCCGGGAATTGAGCTGGTTTGCCAAA
Internal bar code:ACTCTACAGCTGGGGGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4128
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGCGCAACACTACGTCA
Suggested primer 2:GCGTGCGGCATAGTAACTTG