Insertion junction: CLIP2.059213_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059213
Chromosome:chromosome 11
Location:3174973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g475900 (1 of 2) PTHR12121//PTHR12121:SF34 - CARBON CATABOLITE REPRESSOR PROTEIN 4 // LD39302P 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCGATGCATGGATCATGGCTGCAGGAGCCGGCAGCAGGCAGGGGCCC
Internal bar code:GCCCGAATGTACGGGCTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1768
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGCACGTCTGCTGCTAT
Suggested primer 2:ACTTCCATATCCGGGTCCCA