Insertion junction: CLIP2.059214_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059214
Chromosome:chromosome 10
Location:6377998
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464200 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR
Cre10.g464250 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTGGACCTGGCAGAGCGGGCCTGGGCCACGGTGCCGGGACAGCGTGG
Internal bar code:CGCTTGACCGGCCCCTTCGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2387
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCGGAGTAACAGCAGTA
Suggested primer 2:TGGGAATGGGAGGCAGGATA