Insertion junction: CLIP2.059214_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059214
Chromosome:chromosome 10
Location:6378008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464200 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR
Cre10.g464250 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACTGCATCTGTTCGCCACGGTACGCATGCAATCAATACATCGAGCAAC
Internal bar code:GCTGGAGATCCCCGCTGTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3069
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGAATGGGAGGCAGGATA
Suggested primer 2:GCACCGGAGTAACAGCAGTA