Insertion junction: CLIP2.059220_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059220
Chromosome:chromosome 13
Location:3888723
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g589700 VPS20 Subunit of ESCRT-III complex; (1 of 1) K12195 - charged multivesicular body protein 6 (CHMP6, VPS20) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTGCTTGCACACTTGAATTTTCCCTTTTGTAACGTCGCAAGATAAC
Internal bar code:TATTCAGCGTGATCTTGGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:685
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGGTGGTGGATGAAG
Suggested primer 2:CAGAGGCGTTAGTTGCAAGC