Insertion junction: CLIP2.059224_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059224
Chromosome:chromosome 3
Location:3739823
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169150 (1 of 1) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAAAATGTCCGTTTTCGGCAGGAAAGTTGGAGGAAACATTACGTCTGT
Internal bar code:GAGAGGTGGCCCCTAACGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2148
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGGTGCTCTCTATCACA
Suggested primer 2:CCACTACTGTTGACCAGCGT