Insertion junction: CLIP2.059226_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059226
Chromosome:chromosome 17
Location:1931890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709950 (1 of 1) K08272 - calcium binding protein 39 (CAB39, MO25) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAGATGACTAGAGCGTGCGGTGGAAATGCCCAAGCGGAAGAGCTGAGC
Internal bar code:CCTCGTTTTGAACTAGTGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2573
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCTAGGTCTTAAGCCCG
Suggested primer 2:TAGCCGTTCATGCAGCGTAT