Insertion junction: CLIP2.059233_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059233
Chromosome:chromosome 16
Location:5372291
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683300 3'UTR
Cre16.g683350 TEH6 Acyl-CoA thioesterase-like protein; (1 of 2) K17361 - acyl-coenzyme A thioesterase 9 [EC:3.1.2.-] (ACOT9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAATAACTTTTTTTTGTTGGGGCGGGATTTAAGTCTGGAATTTTTCGG
Internal bar code:GGTTGCACTGACGGGCGGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3250
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTTTGCGTTCGTGAGCA
Suggested primer 2:GCATCAGGTGTGGTAGCCTT