Insertion junction: CLIP2.059242_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059242
Chromosome:chromosome 3
Location:558300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145247 TEF11 S-isoprenylcysteine O-methyltransferase; (1 of 3) 2.1.1.100 - Protein-S-isoprenylcysteine O-methyltransferase / Prenylcysteine carboxyl methyltransferase 3'UTR
Cre03.g145267 (1 of 1) 3.5.4.3 - Guanine deaminase / Guanine aminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCCGATCGACACGCGGTGGGCTGTTACACAGATGGAGTCAAGCGGATG
Internal bar code:GTCCAAAGCGGAATTCGGCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1928
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCAGCTCTAGGGCTCTA
Suggested primer 2:TGTTGTCGCGTCAAAAGCTG