Insertion junction: CLIP2.059249_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059249
Chromosome:plastome
Location:81593
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCTCTAGGTCTCATTAGATTATTCTTTAGGTAAATCAATCGCAAACG
Internal bar code:ATAGTAGAGCGGGCAGTGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:310
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCATAGAACCTGCCCAAC
Suggested primer 2:TAAGGGGCAAAGCATGGGAG