Insertion junction: CLIP2.059255_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059255
Chromosome:chromosome 2
Location:1186706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081350 (1 of 1) PTHR11080//PTHR11080:SF2 - PYRAZINAMIDASE/NICOTINAMIDASE // PROTEIN PNC-1, ISOFORM A; Nicotinamidase 3'UTR
Cre02.g081400 BCA1 Branched chain amino acid aminotransferase; (1 of 1) 2.6.1.88 - Methionine transaminase / Methionine-oxo-acid transaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTGACCATAAGAGTCTGATGGGGGCAGGCACGCTGCGAGCCGGCAA
Internal bar code:ATAATGAACATTTAGCAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1062
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTGGCAAATCGTTTT
Suggested primer 2:CAAGTGAACAGTGGCGTGTG