Insertion junction: CLIP2.059268_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059268
Chromosome:chromosome 10
Location:2558423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436400 (1 of 2) PTHR13271//PTHR13271:SF11 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACTAAATCATCGTACAACATGGTCGTCTGTGCACACGAACATGGCATG
Internal bar code:TTTGAGCTAAATGTTAACGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2676
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGTTACGGTACTGCGTT
Suggested primer 2:TTGGAGAAGCTGCCAGACTG