Insertion junction: CLIP2.059268_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059268
Chromosome:chromosome 10
Location:2558423
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g436400 (1 of 2) PTHR13271//PTHR13271:SF11 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAATTAATGCTGTAGCAGCAAACGAACTAAAGCGCGGCACGTTCGTGC
Internal bar code:TTGCGCTGGTAAGGAGTGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1957
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGAAGCTGCCAGACTG
Suggested primer 2:TGCTGTTACGGTACTGCGTT