Insertion junction: CLIP2.059269_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059269
Chromosome:chromosome 7
Location:4546563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344000 (1 of 1) PTHR31988:SF1 - 9-O-ACETYL-N-ACETYLNEURAMINIC ACID DEACETYLASE-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTGGTAGCTTGTCTGAAACAGCGACCACACGGGGCATTAGTACATTTG
Internal bar code:GGATTGACCCGGGTAGTTATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1079
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCCAGACTCTACTTGTT
Suggested primer 2:CAGTCCGCAGACACTCAGTT