Insertion junction: CLIP2.059273_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059273
Chromosome:chromosome 2
Location:8483560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g141900 (1 of 2) PTHR22811//PTHR22811:SF31 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN // RE49489P 3'UTR
Cre02.g141950 MOT19 (1 of 5) PF03765 - CRAL/TRIO, N-terminal domain (CRAL_TRIO_N); Predicted protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCTGTGTATACCTTCCGTCCGTTTGCACGTCCCATATGGTGACACAG
Internal bar code:AGTTCGCTTTGCGGCATCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1488
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTGGCACTGCGTTGTTC
Suggested primer 2:TTCTTCAAGCCGGGCATGAT