Insertion junction: CLIP2.059274_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059274
Chromosome:chromosome 2
Location:6171523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119950 3'UTR
Cre02.g120001 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTGCACCCGGGCAGCTGCCGATGTACGGCGCTCGTCCGAGTTCTCCTA
Internal bar code:CTCGTTGCGTTGTTTCCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTAGCGGGAGTGATGGA
Suggested primer 2:ACACGCGAACAATGTGTTGG