Insertion junction: CLIP2.059274_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059274
Chromosome:chromosome 2
Location:6171526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g119950 3'UTR
Cre02.g120001 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGCGCGCACTCGGAGGGCGCGCGCCCTACTCGTCAATGTCAATGCGC
Internal bar code:CTCGTTGCGTTGTTTCCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1935
LEAP-Seq percent confirming:89.0625
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGCGAACAATGTGTTGG
Suggested primer 2:TGAGTAGCGGGAGTGATGGA