Insertion junction: CLIP2.059290_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059290
Chromosome:chromosome 12
Location:1231577
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g490100 GMT2,TPT2,TPT19 (1 of 3) K15356 - GDP-mannose transporter (VRG4, GONST1); Triose-phosphate transporter 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACTCCTGCGACGGCAACAGCCGCCCGTGGCCGAGCCGCGGCTCTACTT
Internal bar code:GCCCGGATCAGATCAGAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2024
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCACGACAATGGGGGCTA
Suggested primer 2:CCTGAACCCTGTCCCATCAC